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StarDist - Object Detection with Star-Convex Polygons#

This web site provides answers to frequently asked questions (FAQ) when using StarDist.

Please visit the main stardist project page for general documentation, installation instructions, and issue reports.

If you are using StarDist in your research please cite the relevant paper(s):

  author    = {Uwe Schmidt and Martin Weigert and Coleman Broaddus and Gene Myers},
  title     = {Cell Detection with Star-Convex Polygons},
  booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 
  2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part {II}},
  pages     = {265--273},
  year      = {2018},
  doi       = {10.1007/978-3-030-00934-2_30}

  author    = {Martin Weigert and Uwe Schmidt and Robert Haase and Ko Sugawara and Gene Myers},
  title     = {Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy},
  booktitle = {The IEEE Winter Conference on Applications of Computer Vision (WACV)},
  month     = {March},
  year      = {2020},
  doi       = {10.1109/WACV45572.2020.9093435}

  author    = {Martin Weigert and Uwe Schmidt},
  title     = {Nuclei Instance Segmentation and Classification in Histopathology Images with Stardist},
  booktitle = {The IEEE International Symposium on Biomedical Imaging Challenges (ISBIC)},
  year      = {2022},
  doi       = {10.1109/ISBIC56247.2022.9854534}